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* badly destroyed XFS (on LVM) - how to repair?
@ 2012-05-12 12:49 Michael Monnerie
  2012-05-12 13:43 ` Emmanuel Florac
                   ` (3 more replies)
  0 siblings, 4 replies; 7+ messages in thread
From: Michael Monnerie @ 2012-05-12 12:49 UTC (permalink / raw)
  To: xfs


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(This might be an LVM problem, but who knows?)

I have here an XFS that was on a server running within a XenServer 
machine. In the end it existed of 4x 2TB disks:
# pvscan 
  PV /dev/xvdg   VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvdf   VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvdc   VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvde   VG sharestore   lvm2 [1.95 TiB / 0    free]
  Total: 4 [7.81 TiB] / in use: 4 [7.81 TiB] / in no VG: 0 [0   ]

Then by accident the admin made "fdisk /dev/xvdg", created a partition
like this:
Platte /dev/xvdg: 1073 MByte, 1073741824 Byte
139 Köpfe, 8 Sektoren/Spuren, 1885 Zylinder
Einheiten = Zylinder von 1112 × 512 = 569344 Bytes
Disk identifier: 0xb30cf4db

    Gerät  boot.     Anfang        Ende     Blöcke   Id  System
/dev/xvdg1               1        1886     1048448   82  Linux Swap

(partittion starting sector 63), and did "mkswap /dev/xvdg1". After a 
reboot, LVM did not recognize the full disk anymore.

# pvscan 
  Couldn't find device with uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w.
  PV unknown device   VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvdf        VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvdc        VG sharestore   lvm2 [1.95 TiB / 0    free]
  PV /dev/xvde        VG sharestore   lvm2 [1.95 TiB / 0    free]
  Total: 4 [7.81 TiB] / in use: 4 [7.81 TiB] / in no VG: 0 [0 

This is where I jumped in. I must say that in the meantime the source VM 
got deleted, and that I only got access to the data disks. I believe 
/dev/xvdg was the very first of those LVM disks before, but I'm not 
sure.

I tried "pvcreate --uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w --
norestorefile /dev/xvdg", which did not succeed.
Then I made a backup of the first sectors of /dev/xvdg, and did
"dd if=/dev/xvdf of=/dev/xvdg bs=512 count=63", and tried again with
"pvcreate --uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w --norestorefile 
/dev/xvdg" - this time it worked. Strange thing: /dev/sharestore/public 
is not created, it's only accessible via /dev/dm-0, but 
I can mount the XFS but it's destroyed, "ls" shows:
ls: cannot access /1/hope: Invalid argument
ls: cannot access /1/jog: Invalid argument
ls: cannot access /1/maza: Invalid argument
ls: cannot access /1/public: Invalid argument
ls: cannot access /1/upload: Invalid argument
ls: cannot access /1/du.old: Invalid argument
ls: cannot access /1/.fsr: Invalid argument
total 45
drwxrwx---  17 root       1000 4096 May  1 00:00 ./
drwxr-xr-x  25 root    root     632 May 12 12:42 ../
???????????  ? ?       ?          ?            ? .fsr
drwx------   7    1007 nogroup 4096 Oct 19  2010 anse/
-rw-r--r--   1 root    root     951 Jan  1 00:10 du.20120101
-rw-r--r--   1 root    root     456 Feb  1 00:10 du.20120201
-rw-r--r--   1 root    root     455 Mar  1 00:11 du.20120301
-rw-r--r--   1 root    root     464 Apr  1 00:06 du.20120401
-rw-r--r--   1 root    root     464 May  1 00:00 du.20120501
???????????  ? ?       ?          ?            ? du.old
-rwx------   1 root    root     253 Nov  7  2010 find-inode.sh*
???????????  ? ?       ?          ?            ? hope
drwxrwxr-x+  4    1007 nogroup   49 Nov 29  2009 itm/
???????????  ? ?       ?          ?            ? jog
drwx------   6 makedns nogroup 4096 Aug 24  2010 lama/
???????????  ? ?       ?          ?            ? maza
drwx------   2    1008 nogroup   68 Jan 12  2010 paan/
???????????  ? ?       ?          ?            ? public
drwxrwxr-t   5 root    www     4096 Mar 17 11:33 tmp/
drwxr-xr-x   2 nobody  root     144 Mar 17 11:41 torrent/
???????????  ? ?       ?          ?            ? upload
drwx------   2    1003 nogroup   88 Nov 23  2009 vop/

Then I made a xfs_metadump, and xfs_repair, both with version 3.0.1, 
which seems to not work. xfs_repair said this:

# xfs_repair -n /dev/dm-0 2>&1|tee xfs.log
Phase 1 - find and verify superblock...
Phase 2 - using internal log
        - scan filesystem freespace and inode maps...
        - found root inode chunk
Phase 3 - for each AG...
        - scan (but don't clear) agi unlinked lists...
        - process known inodes and perform inode discovery...
        - agno = 0
        - agno = 1
        - agno = 2
        - agno = 3
        - agno = 4
        - agno = 5
        - agno = 6
        - agno = 7
        - agno = 8
        - process newly discovered inodes...
Phase 4 - check for duplicate blocks...
        - setting up duplicate extent list...
        - check for inodes claiming duplicate blocks...
        - agno = 0
        - agno = 2
        - agno = 1
        - agno = 3
        - agno = 4
        - agno = 5
        - agno = 6
        - agno = 7
        - agno = 8
No modify flag set, skipping phase 5
Phase 6 - check inode connectivity...
        - traversing filesystem ...
        - traversal finished ...
        - moving disconnected inodes to lost+found ...
Phase 7 - verify link counts...
No modify flag set, skipping filesystem flush and exiting.

So it found no error. I then installed xfsprogs 3.1.8, and tried the 
repair on the metadump:

# xfs_repair xfs.metadump
Phase 1 - find and verify superblock...
bad primary superblock - bad magic number !!!

attempting to find secondary superblock...
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................found 
candidate secondary superblock...
superblock read failed, offset 1073976639488, size 131072, ag 1, rval 0

fatal error -- No such file or directory

I tried the xfs_repair with v3.1.8 on the volume - again without any 
inconsistencies? I guess I still have a problem with the underlying LVM, 
or it's an error which is currently not checked for in xfs_repair.

Could someone help me?
1) Maybe I need to do more on the /dev/xvdg volume in order to fix that?
2) I can give access to that machine for a developer if that helps.
3) I put the metadump on http://sonbae.zmi.at/xfs.metadump.bz2

Here are some LVM stats if that helps:

# pvdisplay 
  --- Physical volume ---
  PV Name               /dev/xvdg
  VG Name               sharestore
  PV Size               1.95 TiB / not usable 64.00 MiB
  Allocatable           yes (but full)
  PE Size               64.00 MiB
  Total PE              32007
  Free PE               0
  Allocated PE          32007
  PV UUID               396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w
   
  --- Physical volume ---
  PV Name               /dev/xvdf
  VG Name               sharestore
  PV Size               1.95 TiB / not usable 64.00 MiB
  Allocatable           yes (but full)
  PE Size               64.00 MiB
  Total PE              32007
  Free PE               0
  Allocated PE          32007
  PV UUID               fEDk3P-JLRj-cKVj-3AsG-hcbP-LQbi-QcdTl5
   
  --- Physical volume ---
  PV Name               /dev/xvdc
  VG Name               sharestore
  PV Size               1.95 TiB / not usable 64.00 MiB
  Allocatable           yes (but full)
  PE Size               64.00 MiB
  Total PE              32007
  Free PE               0
  Allocated PE          32007
  PV UUID               yQ2GQ4-EX38-Dlb4-RPOB-58Nn-0mg4-CN4w9a
   
  --- Physical volume ---
  PV Name               /dev/xvde
  VG Name               sharestore
  PV Size               1.95 TiB / not usable 64.00 MiB
  Allocatable           yes (but full)
  PE Size               64.00 MiB
  Total PE              32007
  Free PE               0
  Allocated PE          32007
  PV UUID               7exsxJ-F4Cm-eEiv-I1sS-qmIY-7Oxj-caAss5
   
# vgdisplay 
  --- Volume group ---
  VG Name               sharestore
  System ID             
  Format                lvm2
  Metadata Areas        4
  Metadata Sequence No  10
  VG Access             read/write
  VG Status             resizable
  MAX LV                0
  Cur LV                1
  Open LV               1
  Max PV                0
  Cur PV                4
  Act PV                4
  VG Size               7.81 TiB
  PE Size               64.00 MiB
  Total PE              128028
  Alloc PE / Size       128028 / 7.81 TiB
  Free  PE / Size       0 / 0   
  VG UUID               Ieov6b-2qof-KjzF-ypN1-QwZK-YE3C-DcVPeP
   
# lvdisplay 
  /dev/mapper/sharestore-public: open failed: No such file or directory
  --- Logical volume ---
  LV Name                /dev/sharestore/public
  VG Name                sharestore
  LV UUID                VsZljE-lUU2-oqvm-u4y6-xYz7-cpNA-8zBsRH
  LV Write Access        read/write
  LV Status              NOT available
  LV Size                7.81 TiB
  Current LE             128028
  Segments               4
  Allocation             inherit
  Read ahead sectors     1536

The volume is accessible only via /dev/dm-0, it seems this might be my 
problem?

-- 
mit freundlichen Grüssen,
Michael Monnerie, Ing. BSc

it-management Internet Services: Protéger
http://proteger.at [gesprochen: Prot-e-schee]
Tel: +43 660 / 415 6531

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http://oss.sgi.com/mailman/listinfo/xfs

^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
  2012-05-12 12:49 badly destroyed XFS (on LVM) - how to repair? Michael Monnerie
@ 2012-05-12 13:43 ` Emmanuel Florac
  2012-05-12 17:33 ` Michael Monnerie
                   ` (2 subsequent siblings)
  3 siblings, 0 replies; 7+ messages in thread
From: Emmanuel Florac @ 2012-05-12 13:43 UTC (permalink / raw)
  To: Michael Monnerie; +Cc: xfs

Le Sat, 12 May 2012 14:49:56 +0200 vous écriviez:

> The volume is accessible only via /dev/dm-0, it seems this might be
> my problem?

Did you restart the LVM service to reassemble everything properly? So
far you've done everything I would have thought of...

-- 
------------------------------------------------------------------------
Emmanuel Florac     |   Direction technique
                    |   Intellique
                    |	<eflorac@intellique.com>
                    |   +33 1 78 94 84 02
------------------------------------------------------------------------

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http://oss.sgi.com/mailman/listinfo/xfs

^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
@ 2012-05-12 17:16 Michael Monnerie
  0 siblings, 0 replies; 7+ messages in thread
From: Michael Monnerie @ 2012-05-12 17:16 UTC (permalink / raw)
  To:  Emmanuel Florac ; +Cc:  xfs@oss.sgi.com 

I even rebooted the server, because a "vgchange -ay" hangs that session. Still after the reboot it does this, I can't go around this. 

So if lvm is correct, then xfs_repair and xfs_metadump have a problem, as they both seem to not work correctly here. 

Vom iPhone gesendet, bitte Tippfehler zu entschuldigen.
Michael Monnerie
+436604156531

Am 12.05.2012 um 15:43 schrieb "Emmanuel Florac" <eflorac@intellique.com>:

> Le Sat, 12 May 2012 14:49:56 +0200 vous écriviez:
> 
>> The volume is accessible only via /dev/dm-0, it seems this might be
>> my problem?
> 
> Did you restart the LVM service to reassemble everything properly? So
> far you've done everything I would have thought of...
> 
> -- 
> ------------------------------------------------------------------------
> Emmanuel Florac     |   Direction technique
>                    |   Intellique
>                    |    <eflorac@intellique.com>
>                    |   +33 1 78 94 84 02
> ------------------------------------------------------------------------

_______________________________________________
xfs mailing list
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http://oss.sgi.com/mailman/listinfo/xfs

^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
  2012-05-12 12:49 badly destroyed XFS (on LVM) - how to repair? Michael Monnerie
  2012-05-12 13:43 ` Emmanuel Florac
@ 2012-05-12 17:33 ` Michael Monnerie
  2012-05-14 14:54 ` Michael Monnerie
  2012-05-14 15:12 ` Eric Sandeen
  3 siblings, 0 replies; 7+ messages in thread
From: Michael Monnerie @ 2012-05-12 17:33 UTC (permalink / raw)
  To: xfs


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Another strange thing:

I now started a "dd if=/dev/dm-0 of=/dev/null bs=1024k".
For the first seconds(!), it did nothing, I thought it would hang.
Then it started, but it's reading in a strange way:

Device:         rrqm/s   wrqm/s     r/s     w/s    rkB/s    wkB/s avgrq-sz avgqu-sz   await  svctm  %util
xvdg          139378,24     0,00 15893,61    0,00 77640,82     0,00     9,77    35,96    2,26   0,06  99,88
xvda              0,00     0,00    0,00    0,00     0,00     0,00     0,00     0,00    0,00   0,00   0,00
xvde              0,00     0,00    0,00    0,00     0,00     0,00     0,00     0,00    0,00   0,00   0,00
xvdb              0,00     0,00    0,00    0,00     0,00     0,00     0,00     0,00    0,00   0,00   0,00
dm-0              0,00     0,00 155241,52    0,00 77620,76     0,00     1,00   353,51    2,28   0,01  99,88

Very many I/Os and very slow KB/s. What could cause that?
lv readahead is 1536 sectors, that's 128KB per data disk (a 7 disk RAID-5) and should be OK.

-- 
mit freundlichen Grüssen,
Michael Monnerie, Ing. BSc

it-management Internet Services: Protéger
http://proteger.at [gesprochen: Prot-e-schee]
Tel: +43 660 / 415 6531

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_______________________________________________
xfs mailing list
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http://oss.sgi.com/mailman/listinfo/xfs

^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
  2012-05-12 12:49 badly destroyed XFS (on LVM) - how to repair? Michael Monnerie
  2012-05-12 13:43 ` Emmanuel Florac
  2012-05-12 17:33 ` Michael Monnerie
@ 2012-05-14 14:54 ` Michael Monnerie
  2012-05-14 15:12 ` Eric Sandeen
  3 siblings, 0 replies; 7+ messages in thread
From: Michael Monnerie @ 2012-05-14 14:54 UTC (permalink / raw)
  To: xfs


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Am Samstag, 12. Mai 2012, 14:49:56 schrieb Michael Monnerie:
> (This might be an LVM problem, but who knows?)

Seems like it's an XFS problem - could someone help me here?

-- 
mit freundlichen Grüssen,
Michael Monnerie, Ing. BSc

it-management Internet Services: Protéger
http://proteger.at [gesprochen: Prot-e-schee]
Tel: +43 660 / 415 6531

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_______________________________________________
xfs mailing list
xfs@oss.sgi.com
http://oss.sgi.com/mailman/listinfo/xfs

^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
  2012-05-12 12:49 badly destroyed XFS (on LVM) - how to repair? Michael Monnerie
                   ` (2 preceding siblings ...)
  2012-05-14 14:54 ` Michael Monnerie
@ 2012-05-14 15:12 ` Eric Sandeen
  2012-05-15  1:13   ` Michael Monnerie
  3 siblings, 1 reply; 7+ messages in thread
From: Eric Sandeen @ 2012-05-14 15:12 UTC (permalink / raw)
  To: Michael Monnerie; +Cc: xfs

On 5/12/12 7:49 AM, Michael Monnerie wrote:
> (This might be an LVM problem, but who knows?)
> 
> I have here an XFS that was on a server running within a XenServer 
> machine. In the end it existed of 4x 2TB disks:
> # pvscan 
>   PV /dev/xvdg   VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvdf   VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvdc   VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvde   VG sharestore   lvm2 [1.95 TiB / 0    free]
>   Total: 4 [7.81 TiB] / in use: 4 [7.81 TiB] / in no VG: 0 [0   ]
> 
> Then by accident the admin made "fdisk /dev/xvdg", created a partition
> like this:
> Platte /dev/xvdg: 1073 MByte, 1073741824 Byte
> 139 Köpfe, 8 Sektoren/Spuren, 1885 Zylinder
> Einheiten = Zylinder von 1112 × 512 = 569344 Bytes
> Disk identifier: 0xb30cf4db
> 
>     Gerät  boot.     Anfang        Ende     Blöcke   Id  System
> /dev/xvdg1               1        1886     1048448   82  Linux Swap
> 
> (partittion starting sector 63), and did "mkswap /dev/xvdg1". After a 
> reboot, LVM did not recognize the full disk anymore.
> 
> # pvscan 
>   Couldn't find device with uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w.
>   PV unknown device   VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvdf        VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvdc        VG sharestore   lvm2 [1.95 TiB / 0    free]
>   PV /dev/xvde        VG sharestore   lvm2 [1.95 TiB / 0    free]
>   Total: 4 [7.81 TiB] / in use: 4 [7.81 TiB] / in no VG: 0 [0 
> 
> This is where I jumped in. I must say that in the meantime the source VM 
> got deleted, and that I only got access to the data disks. I believe 
> /dev/xvdg was the very first of those LVM disks before, but I'm not 
> sure.
> 
> I tried "pvcreate --uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w --
> norestorefile /dev/xvdg", which did not succeed.
> Then I made a backup of the first sectors of /dev/xvdg, and did
> "dd if=/dev/xvdf of=/dev/xvdg bs=512 count=63", and tried again with
> "pvcreate --uuid 396XfX-EbMZ-0J6q-C3bj-3n6d-vruJ-6Oiy7w --norestorefile 
> /dev/xvdg" - this time it worked. Strange thing: /dev/sharestore/public 
> is not created, it's only accessible via /dev/dm-0, but 
> I can mount the XFS but it's destroyed, "ls" shows:
> ls: cannot access /1/hope: Invalid argument
> ls: cannot access /1/jog: Invalid argument
> ls: cannot access /1/maza: Invalid argument
> ls: cannot access /1/public: Invalid argument
> ls: cannot access /1/upload: Invalid argument
> ls: cannot access /1/du.old: Invalid argument
> ls: cannot access /1/.fsr: Invalid argument
> total 45

Anything in dmesg?

> drwxrwx---  17 root       1000 4096 May  1 00:00 ./
> drwxr-xr-x  25 root    root     632 May 12 12:42 ../
> ???????????  ? ?       ?          ?            ? .fsr
> drwx------   7    1007 nogroup 4096 Oct 19  2010 anse/
> -rw-r--r--   1 root    root     951 Jan  1 00:10 du.20120101
> -rw-r--r--   1 root    root     456 Feb  1 00:10 du.20120201
> -rw-r--r--   1 root    root     455 Mar  1 00:11 du.20120301
> -rw-r--r--   1 root    root     464 Apr  1 00:06 du.20120401
> -rw-r--r--   1 root    root     464 May  1 00:00 du.20120501
> ???????????  ? ?       ?          ?            ? du.old
> -rwx------   1 root    root     253 Nov  7  2010 find-inode.sh*
> ???????????  ? ?       ?          ?            ? hope
> drwxrwxr-x+  4    1007 nogroup   49 Nov 29  2009 itm/
> ???????????  ? ?       ?          ?            ? jog
> drwx------   6 makedns nogroup 4096 Aug 24  2010 lama/
> ???????????  ? ?       ?          ?            ? maza
> drwx------   2    1008 nogroup   68 Jan 12  2010 paan/
> ???????????  ? ?       ?          ?            ? public
> drwxrwxr-t   5 root    www     4096 Mar 17 11:33 tmp/
> drwxr-xr-x   2 nobody  root     144 Mar 17 11:41 torrent/
> ???????????  ? ?       ?          ?            ? upload
> drwx------   2    1003 nogroup   88 Nov 23  2009 vop/
> 
> Then I made a xfs_metadump, and xfs_repair, both with version 3.0.1, 
> which seems to not work. xfs_repair said this:
> 
> # xfs_repair -n /dev/dm-0 2>&1|tee xfs.log
> Phase 1 - find and verify superblock...

...

> No modify flag set, skipping filesystem flush and exiting.
> 
> So it found no error. I then installed xfsprogs 3.1.8, and tried the 
> repair on the metadump:
> 
> # xfs_repair xfs.metadump

You have to mdrestore the metadump before you can point repair it it, so that's not a valid operation.  No 

<later>

> Seems like it's an XFS problem - could someone help me here?

Considering that the problem began when the block device got
repartitioned etc, I don't see how this can be an XFS problem...

-Eric


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^ permalink raw reply	[flat|nested] 7+ messages in thread

* Re: badly destroyed XFS (on LVM) - how to repair?
  2012-05-14 15:12 ` Eric Sandeen
@ 2012-05-15  1:13   ` Michael Monnerie
  0 siblings, 0 replies; 7+ messages in thread
From: Michael Monnerie @ 2012-05-15  1:13 UTC (permalink / raw)
  To: xfs


[-- Attachment #1.1: Type: text/plain, Size: 1143 bytes --]

Am Montag, 14. Mai 2012, 10:12:30 schrieb Eric Sandeen:
> Anything in dmesg?

No, nothing. Not for lvm, not for xfs.

> You have to mdrestore the metadump before you can point repair it it,
> so that's not a valid operation.  No 

Ah, silly me. Right, will try.

> Considering that the problem began when the block device got
> repartitioned etc, I don't see how this can be an XFS problem...

The problem is that xfs_repair does not at all complain, but when I 
mount it nothing is correct. I cannot even get those data which is at 
least displayed normally. xfs_repair doesn't find a problem - that's the 
problem.

All data should be there. As I understand it, partitioning a disk writes 
to the partition table (sector 0?), the partition created should have 
started at sector 63 or 2048, and the "mkswap" will have written only a 
very small amount too. I guess that a very bad block has been hit, but 
is really everything lost now?

-- 
mit freundlichen Grüssen,
Michael Monnerie, Ing. BSc

it-management Internet Services: Protéger
http://proteger.at [gesprochen: Prot-e-schee]
Tel: +43 660 / 415 6531

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end of thread, other threads:[~2012-05-15  1:13 UTC | newest]

Thread overview: 7+ messages (download: mbox.gz follow: Atom feed
-- links below jump to the message on this page --
2012-05-12 12:49 badly destroyed XFS (on LVM) - how to repair? Michael Monnerie
2012-05-12 13:43 ` Emmanuel Florac
2012-05-12 17:33 ` Michael Monnerie
2012-05-14 14:54 ` Michael Monnerie
2012-05-14 15:12 ` Eric Sandeen
2012-05-15  1:13   ` Michael Monnerie
  -- strict thread matches above, loose matches on Subject: below --
2012-05-12 17:16 Michael Monnerie

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